Our research interests
2024
Database-driven approach to microbiome research
We collaborate with database programmers and software designers to build web-based tools that empower researchers to integrate, query and visualize microbiome data and metadata from large numbers of samples.
Transcriptional control of immunity and inflammation
We use single-cell and bulk-cell RNA sequencing to study gene expression in tissues and cells during infection.
Enteric diseases and the microbiome
We’re interested in large animal models and in vitro systems to study the role of the microbiome in health and disease.
Bioinformatics Education
We’re interested in teaching wet-lab biologists all about coding in R and how to employ best practices in bioinformatics.